Twisting and Stretching
Single Molecules
Adding a twist to DNA

Bibliography

Limit Field type
Edit 0 Mechanically controlled DNA extrusion from a palindromic sequence by single molecule micromanipulation
A. Dawid, F. Guillemot, C. Breme, V. Croquette, F. Heslot,
Phys. Rev. Lett. (2006) 96-18 p. PubMed
Edit 1 Direct observation of DNA distortion by the RSC complex
G. Lia, E. Praly, HA. Ferreira, C. Stockdale, YC. Tse-dinh, D. Dunlap, V. Croquette, D. Bensimon, T. Owen-hughes,
Mol. Cell (2006) 21-3 p.417 PubMed
Edit 2 Dynamics of initiation, termination and reinitiation of DNA translocation by the motor protein EcoR124I
R. Seidel, JGP. Bloom, J. Van Noort, CF. Dutta, NH. Dekker, K. Firman, MD. Szczelkun, C. Dekker,
Embo J. (2005) 24-23 p.4188 PubMed
Edit 3 Statistical determination of the step size of molecular motors
KC. Neuman, OA. Saleh, T. Lionnet, G. Lia, JF. Allemand, D. Bensimon, V. Croquette,
J. Phys.-Condes. Matter (2005) 17-47 p.S3811 PubMed
Edit 4 Biocompatible force sensor with optical readout and dimensions of 6 nm(3)
H. Shroff, BM. Reinhard, M. Siu, H. Agarwal, A. Spakowitz, J. Liphardt,
Nano Lett. (2005) 5-7 p.1509 PubMed
Edit 5 Topoisomerase IV bends and overtwists DNA upon binding
G. Charvin, TR. Strick, D. Bensimon, V. Croquette,
Biophys. J. (2005) 89-1 p.384 Biophyscal publications
Edit 6 Braiding DNA: Experiments, simulations, and models
G. Charvin, A. Vologodskii, D. Bensimon, V. Croquette,
Biophys. J. (2005) 88-6 p.4124 Biophyscal publications
Edit 7 Single-molecule manipulation measurements of DNA transport proteins
OA. Saleh, JF. Allemand, V. Croquette, D. Bensimon,
ChemPhysChem (2005) 6-5 p.813 PubMed
Edit 8 Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB
DA. Koster, V. Croquette, C. Dekker, S. Shuman, NH. Dekker,
Nature (2005) 434-7033 p.671 PubMed
Edit 9 Single-molecule DNA nanomanipulation: Improved resolution through use of shorter DNA fragments
A. Revyakin, RH. Ebright, TR. Strick,
Nat. Methods (2005) 2-2 p.127 PubMed
Edit 10 Single-molecule study of DNA unlinking by topoisomerase IV: Influence of the crossing angle.
KC. Neuman, G. Charvin, D. Bensimon, V. Croquette,
Biophys. J. (2005) 88-1 p.15A Biophyscal publications
Edit 11 Single molecule investigations of the mechanochemical cycle of DNA gyrase
J. Gore, MD. Stone, Z. Bryant, NJ. Crisona, S. Mitelheiser, A. Maxwell, NR. Cozzarelli, C. Bustamante,
Biophys. J. (2005) 88-1 p.184A Biophyscal publications
Edit 12 Topoisomerase 1B: its mechanism and interactions with spinning DNA studied at the single molecule level
D. Koster, S. Shuman, C. Dekker, NH. Dekker,
Biophys. J. (2005) 88-1 p.381A Biophyscal publications
Edit 13 Single-molecule measurements of the persistence length of double-stranded RNA
JA. Abels, F. Moreno-herrero, T. Van Der Heijden, PTM. Veenhuizen, MM. Bruinink, C. Dekker, NH. Dekker,
Biophys. J. (2005) 88-1 p.570A Biophyscal publications
Edit 14 Human Rad51 filaments on double- and single-stranded DNA: correlating regular and irregular forms with recombination function
D. Ristic, M. Modesti, T. Van Der Heijden, J. Van Noort, C. Dekker, R. Kanaar, C. Wyman,
Nucleic Acids Res. (2005) 33-10 p.3292 PubMed
Edit 15 Extracting DNA twist rigidity from experimental supercoiling data
S. Neukirch,
Phys. Rev. Lett. (2004) 93-19 p. PubMed
Edit 16 Micromechanical analysis of the binding of DNA-bending proteins HMGB1, NHP6A, and HU reveals their ability to form highly stable DNA-protein complexes
D. Skoko, B. Wong, RC. Johnson, JF. Marko,
Biochemistry (2004) 43-43 p.13867 PubMed
Edit 17 Electromagnetic needles with submicron pole tip radii for nanomanipulation of biomolecules and living cells
BD. Matthews, DA. Lavan, DR. Overby, J. Karavitis, DE. Ingber,
Appl. Phys. Lett. (2004) 85-14 p.2968 PubMed
Edit 18 Studies on biomolecules using single molecule imaging and manipulation techniques
Y. Harada,
Sci. Technol. Adv. Mater. (2004) 5-5-6 p.709 PubMed

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